Bioinformatics scientist (cancer imaging)

Deadline: 19 February 2023

Employment term: Permanent

Category: Software development

Job type: Full time

Location: Yerevan

Job description:

BostonGene is opening a position at Biomedical imaging team. You will work with imaging data of different modalities, immunohistochemistry, multiplex fluorescence. Produce statistical analysis, create production ready data pipelines, and integrate it with R&D and clinical systems.

We offer:

  • The office is located in Yerevan, Armenia, company supports relocation, we provide airplane tickets, hotel accommodation for two weeks, full support in official paperwork, and work permits in Armenia;
  • Competitive salary and medical insurance;
  • Full-time position, permanent contract, flexible working hours;
  • Versatile professional environment: bioinformatics, biologists, physicians, and software developers who united to save people’s lives.

Job responsibilities

  • Work on semantic and instance segmentation models for histological images (H&E, MxIF & IHC) for tissue features and cell instances;
  • To design and implement segmentation techniques for histological images (MxIF and H&E), and create an automated system for classifying cells;
  • Work on cell classification approaches: clusterization, reference atlas creation, and classification approaches;
  • Work on cell community detection models (graph clustering approaches);
  • Work on research collaboration projects with leading American hospitals and institutions, provision of visualization and statistical data analysis;
  • Work on large image viewing and annotation tools, work on formats for fast large image processing;
  • Creation of distributed data processing pipelines.
  • Present your work internally and share key results with the team on a regular basis.

Required qualifications

  • knowledge of python and common data processing and machine learning libraries: numpy, pandas, scipy, scikit-learn;
  • experience with data visualization using matplotlib, Dash or other libraries;
  • knowledge and experience in statistical and data mining techniques: GLM/Regression, Random Forest, Boosting, Trees;
  • experience with relational databases, knowledge of SQL;
  • experience with processing of single cell data or spatial transcriptomics data;
  • experience with deep learning frameworks would be a bonus, pytorch or tensorflow.

Required candidate level: Mid level

Additional information

Аpply online via staff.am and follow entire application process.

Professional skills

Python

Machine Learning

Soft skills

Positive attitude

Teamwork

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Benefits

Medical insurance
Flexible working schedule
Complimentary tea, coffee and refreshments
Free parking
Knowledge sharing culture
Business trips
Emotional & Mental Wellbeing Programs
No dress code
Staff referral program
Regular salary review
Professional Development Reimbursement
Global Business Travel Insurance

Contact details

Website http://www.bostongene.com/

Address: Meridian Exhibition Center, 1 Voskerichneri Street, Yerevan 0015, Yerevan, Armenia

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